Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007788.1 Corchorus capsularis cultivar CVL-1 contig07809, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23507

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8044--8074
15
2.1
15
93
0
53
16
0
0
83
0.64
9719--9793
1
75.0
1
72
0
60
0
1
12
86
0.63
9715--9787
32
2.3
32
92
4
121
0
0
13
86
0.58
9715--9787
38
1.9
38
97
0
137
0
0
13
86
0.58
9715--9787
6
11.5
6
85
11
101
0
0
13
86
0.58
11338--11434
47
2.1
47
98
0
185
30
15
13
40
1.86
18307--19685
333
4.1
333
89
1
2066
33
15
16
34
1.90
18307--19685
665
2.1
666
89
1
2095
33
15
16
34
1.90
19531--19859
174
1.9
174
87
0
487
31
19
16
33
1.93
19698--22930
332
9.9
332
86
5
3998
32
15
18
34
1.91
22742--23120
190
2.0
189
92
0
623
37
12
16
32
1.87
22409--23450
520
2.0
521
88
3
1542
34
13
17
34
1.90

Tables:   1

The End!