Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007853.1 Corchorus capsularis cultivar CVL-1 contig07874, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21986

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2093--2774
66
10.0
65
79
10
586
31
20
9
38
1.85
2543--2597
14
3.7
15
70
15
51
32
21
9
36
1.85
2633--2771
74
1.9
75
90
1
226
31
20
8
39
1.83
2093--2770
35
19.7
35
78
10
600
31
20
10
38
1.85
6932--7025
13
6.9
13
74
16
66
29
0
11
58
1.34
6936--7016
42
1.9
43
97
2
155
29
0
11
59
1.32
7427--7467
21
1.9
22
85
5
57
36
7
34
21
1.82
9551--9610
24
2.5
24
75
2
77
36
6
8
48
1.60
11693--11744
15
3.3
15
77
15
50
5
0
44
50
1.26
11693--11744
9
6.1
9
73
13
56
5
0
44
50
1.26
11795--11867
21
3.5
21
71
0
65
5
5
50
38
1.49
13724--13812
43
2.1
43
100
0
178
50
15
8
24
1.73
20569--21087
265
2.0
265
97
0
975
42
16
16
23
1.88

Tables:   1

The End!