Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01007868.1 Corchorus capsularis cultivar CVL-1 contig07889, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6606

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10--58
2
24.5
2
100
0
98
0
48
0
51
1.00
2823--3226
35
11.2
35
77
11
413
38
7
16
37
1.77
2916--2976
21
2.9
21
85
0
86
47
1
13
37
1.52
2916--2984
21
3.3
21
83
0
66
47
4
11
36
1.60
2881--3163
77
3.8
77
84
6
409
40
7
15
36
1.75
2823--3255
147
3.0
147
91
2
669
39
7
15
37
1.76
3063--3255
21
9.3
21
65
15
87
43
5
14
36
1.68
3100--3262
68
2.7
56
74
20
173
39
6
16
37
1.74
3173--3229
16
3.4
16
70
13
51
40
5
15
38
1.70
3159--3283
56
2.2
56
92
0
214
40
5
15
38
1.70
3243--3310
35
1.9
35
84
0
91
39
5
16
38
1.73
3251--3322
35
2.2
34
82
9
87
38
6
16
37
1.76

Tables:   1

The End!