Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008021.1 Corchorus capsularis cultivar CVL-1 contig08042, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5256

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--995
49
18.9
49
75
13
583
47
4
21
27
1.69
45--1108
56
20.0
54
78
10
824
47
4
21
27
1.69
94--1099
316
3.1
324
82
8
971
47
4
21
27
1.69
1--1110
425
2.6
426
90
3
1746
47
4
21
27
1.69
1--1099
109
10.4
103
77
13
745
47
4
21
27
1.69
1--1099
110
10.4
107
78
9
1030
47
4
21
27
1.69
2171--2311
33
4.3
32
80
7
131
22
41
26
9
1.84
3213--3246
8
4.1
8
85
7
50
58
14
2
23
1.50
3325--3353
5
6.0
5
92
8
51
82
0
0
17
0.66

Tables:   1

The End!