Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008037.1 Corchorus capsularis cultivar CVL-1 contig08058, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31291

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1288--3340
199
10.3
198
85
4
2494
33
14
17
34
1.90
1288--3340
600
3.4
592
84
5
2532
33
14
17
34
1.90
18885--18968
33
2.6
32
81
9
89
15
30
42
10
1.81
19049--19105
24
2.4
24
96
0
105
31
3
3
61
1.30
19062--19113
24
2.2
24
89
0
77
48
3
3
44
1.39
19122--19246
33
3.8
33
91
1
189
10
30
42
16
1.82
21814--21861
24
2.0
24
95
0
87
27
12
12
47
1.77
24628--24730
53
1.9
53
88
0
152
36
27
19
16
1.93
24680--24780
31
3.3
31
82
8
116
32
26
21
18
1.97

Tables:   1

The End!