Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008091.1 Corchorus capsularis cultivar CVL-1 contig08112, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34680

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18879--18913
18
1.9
18
94
0
61
0
51
5
42
1.25
26950--27245
31
10.0
31
85
9
399
22
13
16
47
1.81
26964--27245
58
4.8
59
85
9
377
22
13
16
47
1.81
27258--27340
22
3.8
22
80
0
85
24
24
19
32
1.97
27256--27340
44
1.9
44
85
0
116
23
24
18
32
1.97
27863--28095
31
7.7
31
86
10
322
22
13
17
47
1.82
27878--28095
58
3.7
60
87
9
288
22
13
17
46
1.82
27863--28095
89
2.6
89
92
1
385
22
13
17
47
1.82
29198--29347
31
5.0
31
72
7
130
26
12
16
44
1.83
30216--33241
361
8.6
363
79
9
3062
33
15
15
36
1.88
31180--34677
330
10.3
330
77
11
3169
33
15
14
36
1.88
32206--34675
691
3.6
684
79
11
1857
34
14
14
36
1.87
33226--34591
689
2.0
684
83
5
1732
34
15
14
36
1.87

Tables:   1

The End!