Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008110.1 Corchorus capsularis cultivar CVL-1 contig08131, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3740

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
298--476
36
5.0
35
93
2
259
29
25
10
35
1.88
469--641
37
4.7
36
87
5
197
23
28
8
40
1.83
569--626
19
3.2
19
65
9
57
18
32
10
37
1.85
488--627
73
1.9
74
91
1
228
22
30
7
39
1.82
823--1264
36
11.9
36
76
13
330
26
19
10
44
1.82
1273--1514
41
5.9
41
84
2
290
26
21
12
40
1.88

Tables:   1

The End!