Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008179.1 Corchorus capsularis cultivar CVL-1 contig08200, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10772

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--58
2
29.0
2
100
0
116
0
50
0
50
1.00
109--140
2
16.0
2
100
0
64
50
0
0
50
1.00
2164--2227
26
2.5
26
81
0
83
46
6
17
29
1.72
2740--4026
199
6.7
196
84
6
1384
33
12
18
35
1.89
2740--4025
398
3.3
390
82
9
1539
33
12
18
35
1.89
6109--6153
20
2.2
20
84
8
54
35
20
2
42
1.64
6556--6603
23
2.0
25
84
11
66
50
2
2
45
1.25
8063--8117
29
2.0
28
85
7
76
23
23
14
38
1.92
8203--8276
29
2.5
30
91
4
123
36
14
29
18
1.91
9457--9510
26
2.0
27
82
3
65
51
5
12
29
1.63

Tables:   1

The End!