Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008246.1 Corchorus capsularis cultivar CVL-1 contig08267, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23830

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6788--6823
2
18.5
2
94
5
65
50
0
0
50
1.00
6963--7020
21
2.7
21
73
10
55
51
10
5
32
1.58
9998--10358
47
7.7
46
86
5
465
40
10
10
37
1.75
9995--10358
142
2.6
140
87
5
509
40
10
10
37
1.75
10096--10268
26
7.2
25
60
23
68
39
10
11
38
1.77
10006--10358
189
1.9
188
88
2
530
40
10
10
37
1.75
15995--16034
18
2.2
19
90
4
64
75
2
22
0
0.93
15996--16037
10
4.4
10
79
11
52
73
2
23
0
0.94

Tables:   1

The End!