Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008698.1 Corchorus capsularis cultivar CVL-1 contig08719, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38834

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2748--4250
205
7.5
199
82
5
1727
33
13
18
34
1.89
2748--4253
404
3.7
398
82
6
1782
33
13
18
34
1.89
23774--23878
29
3.6
29
75
10
113
35
14
18
32
1.90
23745--23903
60
2.7
60
89
2
239
35
14
18
30
1.91
23803--23906
31
3.4
31
76
10
115
37
14
18
29
1.90
23947--24108
60
2.7
60
80
5
193
30
15
14
38
1.88
24354--24378
11
2.3
11
100
0
50
92
0
8
0
0.40
33429--33507
25
3.5
25
69
25
84
40
6
2
50
1.41
33421--33506
42
2.0
42
97
0
163
38
5
2
53
1.38
36356--36380
2
12.5
2
100
0
50
52
0
0
48
1.00
38566--38607
20
2.1
20
86
0
57
19
38
7
35
1.79

Tables:   1

The End!