Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008740.1 Corchorus capsularis cultivar CVL-1 contig08761, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44598

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5297--9537
785
5.4
780
82
4
4692
27
18
18
35
1.94
10104--10160
23
2.5
23
82
0
69
61
0
8
29
1.26
11322--11525
78
2.8
71
82
10
218
38
16
5
38
1.73
12640--12966
35
9.3
35
87
2
417
35
18
18
27
1.95
12640--13325
105
6.5
105
86
4
465
34
20
16
28
1.95
12640--13409
70
11.0
69
86
4
727
34
20
16
28
1.94
12880--13402
35
14.9
35
87
3
741
33
22
14
29
1.94
14240--14282
12
3.7
12
81
3
52
11
13
2
72
1.22
19863--19903
21
2.0
21
95
0
73
12
26
14
46
1.80
22920--22955
16
2.3
16
90
4
56
61
8
2
27
1.39
24236--24271
19
1.9
18
88
5
54
33
22
2
41
1.68
24435--24473
20
1.9
21
84
5
53
56
2
20
20
1.54
25781--25817
17
2.1
18
90
5
58
64
2
13
18
1.39
27115--27156
16
2.6
16
92
0
66
16
23
30
28
1.96
32764--32799
16
2.3
16
90
4
56
61
8
2
27
1.39
34068--34103
19
1.9
18
88
5
54
33
22
2
41
1.68
35143--35184
14
3.0
14
82
10
50
28
4
0
66
1.12
35237--35439
78
2.8
71
82
10
209
38
17
5
37
1.74
40751--40885
55
2.3
57
81
11
157
50
13
6
29
1.67

Tables:   1

The End!