Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01008863.1 Corchorus capsularis cultivar CVL-1 contig08884, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12307

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
675--1449
35
22.7
34
81
8
785
38
10
18
32
1.85
1124--1247
16
7.1
18
66
15
71
37
8
16
38
1.78
8282--8314
6
5.5
6
100
0
66
54
15
0
30
1.41
8311--8355
13
3.5
13
84
3
65
55
6
13
24
1.62
8311--8363
25
2.1
25
86
6
72
58
7
11
22
1.57

Tables:   1

The End!