Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009070.1 Corchorus capsularis cultivar CVL-1 contig09091, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5486

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1230--1307
33
2.4
33
88
0
111
41
24
8
25
1.84
1254--1318
33
2.0
33
96
0
121
41
20
7
30
1.80
1334--1430
33
2.9
33
82
0
86
42
20
10
26
1.84
2321--2385
33
2.0
33
87
6
96
36
23
9
30
1.86
2389--2869
258
1.9
258
93
0
836
36
16
26
20
1.93
3754--3787
8
4.1
8
85
7
50
58
14
2
23
1.50
3904--5486
153
10.4
152
88
3
2146
39
17
19
23
1.92
3912--5486
608
2.6
608
86
3
2279
39
17
19
23
1.92

Tables:   1

The End!