Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009116.1 Corchorus capsularis cultivar CVL-1 contig09137, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45980

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8366--9419
35
30.5
34
84
4
1153
33
18
9
38
1.84
8366--9419
70
15.2
69
86
4
1292
33
18
9
38
1.84
8376--9358
19
56.8
18
63
17
336
33
18
9
37
1.84
8366--9419
105
10.2
105
85
4
1320
33
18
9
38
1.84
12801--12868
28
2.4
28
85
0
82
39
30
14
14
1.87
16227--17122
443
2.0
435
82
7
1065
31
15
12
40
1.84
40843--40898
18
3.1
18
80
10
69
51
1
0
46
1.11
40856--40893
16
2.4
16
91
8
60
55
2
0
42
1.14
41027--41092
33
1.9
36
87
9
102
16
12
1
69
1.25
41017--41092
37
2.1
37
85
7
104
21
13
2
63
1.42
45653--45727
32
2.5
29
85
8
98
50
21
5
22
1.68

Tables:   1

The End!