Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009174.1 Corchorus capsularis cultivar CVL-1 contig09195, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26108

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3521--3577
2
29.5
2
83
13
75
50
0
1
47
1.11
8834--8907
33
2.5
30
79
14
82
33
9
10
45
1.71
13356--13392
16
2.2
17
90
4
58
16
10
21
51
1.74
13474--13514
2
20.0
2
85
5
55
48
7
0
43
1.30
16078--16234
74
2.1
74
92
0
269
20
29
9
40
1.84
22773--22800
14
2.0
14
100
0
56
42
14
7
35
1.73
24579--25630
196
5.4
196
81
7
1122
34
18
13
33
1.90
24579--25628
394
2.7
389
82
6
1212
34
18
14
33
1.90
24626--25628
387
2.6
387
82
6
1177
34
18
13
33
1.90

Tables:   1

The End!