Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009204.1 Corchorus capsularis cultivar CVL-1 contig09225, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41138

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12607--12649
22
2.0
22
81
4
52
55
13
9
20
1.66
19130--19173
2
22.0
2
90
0
70
45
0
0
54
0.99
21661--24267
335
7.9
335
85
5
3314
36
15
14
33
1.89
21676--24278
1000
2.6
991
86
5
3513
36
16
14
32
1.89
24938--27561
336
7.8
335
86
3
3401
35
15
15
33
1.89
29155--29216
26
2.4
26
76
17
67
17
3
12
66
1.38
29396--34793
336
16.1
336
86
3
6939
35
15
15
33
1.89
29405--34793
673
8.0
672
86
3
6938
35
15
15
33
1.89
39134--39197
33
1.9
33
93
0
110
31
20
21
26
1.98

Tables:   1

The End!