Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009264.1 Corchorus capsularis cultivar CVL-1 contig09285, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7431

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
329--578
35
7.2
35
83
10
307
39
10
18
32
1.84
329--918
70
8.2
66
75
16
423
40
11
17
31
1.84
481--646
90
1.9
86
80
12
194
37
10
17
33
1.85
455--696
121
2.0
122
94
2
425
38
9
17
33
1.83
522--630
55
2.0
53
84
10
141
36
11
18
33
1.86
576--918
35
9.8
33
81
8
222
40
11
16
30
1.84
341--910
17
32.6
18
63
20
151
40
11
16
31
1.85
618--677
31
1.9
31
89
0
93
36
6
23
33
1.81
581--932
105
3.3
103
79
15
348
40
12
15
30
1.84
1851--1890
16
2.5
16
92
8
64
7
10
22
60
1.54
6488--6519
1
32.0
1
100
0
64
0
0
0
100
0.00

Tables:   1

The End!