Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009325.1 Corchorus capsularis cultivar CVL-1 contig09346, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50889

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1113--1204
23
4.2
22
72
19
75
56
6
6
30
1.50
1270--1300
2
15.5
2
100
0
62
51
0
0
48
1.00
1610--3199
439
3.6
441
84
5
1803
42
13
14
29
1.84
7226--7336
57
2.0
56
85
5
154
54
5
7
33
1.51
8965--9000
18
2.0
18
88
0
54
19
22
11
47
1.80
30132--30161
15
2.0
15
93
0
51
13
23
6
56
1.60
42270--42301
2
16.5
2
93
6
57
46
0
0
53
1.00
44569--44598
13
2.3
13
100
0
60
50
10
6
33
1.62
45166--45206
21
1.9
22
90
5
66
48
2
9
39
1.49
44972--45444
239
2.0
233
82
13
570
42
9
12
34
1.76
45874--45964
46
1.9
48
88
4
141
35
13
13
38
1.83
46969--47451
166
2.9
164
81
5
587
38
15
14
31
1.88
47477--47502
2
13.0
2
100
0
52
50
0
0
50
1.00
48091--48178
45
2.0
45
95
2
160
25
22
19
32
1.97

Tables:   1

The End!