Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009390.1 Corchorus capsularis cultivar CVL-1 contig09411, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6162

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1743--1767
2
12.5
2
100
0
50
48
0
0
52
1.00
3154--3219
27
2.4
27
87
5
89
57
10
0
31
1.33
3625--3681
24
2.4
24
84
0
78
29
24
28
17
1.97
3656--3763
31
3.5
31
88
6
159
30
22
25
21
1.98
4689--4741
22
2.3
23
81
12
65
47
7
13
32
1.70
4924--6162
199
6.3
197
82
5
1335
34
13
17
34
1.88
4924--6148
395
3.1
393
84
4
1475
34
13
17
35
1.88

Tables:   1

The End!