Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009530.1 Corchorus capsularis cultivar CVL-1 contig09551, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37894

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
418--467
23
2.2
23
100
0
100
36
22
12
30
1.90
12506--12532
2
13.5
2
100
0
54
51
0
0
48
1.00
26449--26480
12
2.7
12
90
0
55
81
0
18
0
0.70
29499--30368
435
2.0
430
93
2
1436
28
18
15
37
1.91
32176--32398
122
1.8
120
88
1
338
13
23
20
42
1.87
32461--32771
20
15.6
20
70
6
209
35
6
28
29
1.81
32446--32751
158
1.9
160
89
3
481
36
5
28
29
1.81
32446--32771
41
8.1
41
86
4
441
35
6
28
29
1.81
34249--34389
74
1.9
74
94
0
246
14
18
34
31
1.91
35756--37894
333
6.5
333
87
3
2798
32
15
16
35
1.90

Tables:   1

The End!