Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009638.1 Corchorus capsularis cultivar CVL-1 contig09659, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28829

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5161--5194
2
17.0
2
100
0
68
50
0
0
50
1.00
11432--11470
21
1.9
20
94
5
69
5
20
23
51
1.67
15382--20207
332
14.5
331
78
6
4687
35
16
14
33
1.89
14096--20207
669
9.1
666
81
6
6627
35
16
14
33
1.89
23414--26250
673
4.3
667
87
4
4152
35
16
14
34
1.89
26070--26431
180
2.0
178
87
1
517
38
13
11
37
1.81
26248--28829
334
7.7
332
76
7
2336
35
16
13
34
1.88
26248--28829
666
3.8
667
87
5
3507
35
16
13
34
1.88
27777--27818
18
2.3
18
95
0
75
19
26
19
35
1.95

Tables:   1

The End!