Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009684.1 Corchorus capsularis cultivar CVL-1 contig09705, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14396

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
424--506
42
2.0
42
92
0
139
37
18
6
38
1.75
730--845
16
7.3
16
76
8
94
36
37
17
8
1.80
730--850
32
3.8
33
84
6
106
37
36
18
8
1.81
730--846
48
2.4
48
79
8
130
35
37
17
8
1.81
962--1041
42
1.9
41
92
2
133
16
35
20
28
1.94
1785--3348
217
7.2
218
87
2
2083
37
19
7
36
1.79
3477--4012
217
2.5
217
91
0
849
33
7
20
38
1.81
9040--9190
36
4.2
36
90
2
241
27
20
10
41
1.85
9204--9982
41
19.2
41
91
1
1182
22
21
10
46
1.81
9969--10213
37
6.6
37
87
0
373
26
21
6
45
1.75
10190--10492
41
7.4
41
86
2
349
24
16
10
47
1.78

Tables:   1

The End!