Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009836.1 Corchorus capsularis cultivar CVL-1 contig09857, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  44415

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
2
16.5
2
100
0
66
51
0
0
48
1.00
33838--33922
42
2.0
42
100
0
170
11
31
23
32
1.91
35693--35782
45
2.0
45
91
4
146
30
20
14
35
1.92
37360--37402
3
14.3
3
100
0
86
34
0
0
65
0.93
38531--38555
2
12.5
2
100
0
50
52
0
0
48
1.00
41029--41070
2
21.0
2
80
9
50
50
2
2
45
1.27
42080--43246
324
3.6
321
85
2
1525
32
16
15
35
1.91
43010--43485
239
2.0
240
86
4
667
31
17
15
35
1.91
42689--43806
560
2.0
561
87
2
1613
31
16
16
35
1.91
43252--44414
320
3.7
320
87
4
1586
30
16
16
35
1.91

Tables:   1

The End!