Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009871.1 Corchorus capsularis cultivar CVL-1 contig09892, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13322

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--35
2
17.0
2
93
0
59
52
0
0
47
1.00
3732--3827
32
2.8
35
76
12
99
28
20
9
41
1.83
3820--4076
41
6.3
41
87
5
360
23
21
9
46
1.80
3824--4076
122
2.1
123
90
3
395
23
20
9
46
1.80
4063--4456
37
10.9
37
84
6
405
25
17
9
46
1.78
4063--4460
74
5.5
74
83
7
449
25
17
9
46
1.78
4063--4456
111
3.6
110
84
6
500
25
17
9
46
1.78
4465--4651
41
4.4
42
79
9
200
24
18
11
45
1.82
4471--4629
42
3.7
41
80
12
176
25
19
11
44
1.84
4461--4634
89
2.0
88
86
3
242
24
18
12
44
1.83
8939--8972
17
2.0
17
94
0
59
44
0
2
52
1.16
8938--8975
19
2.0
19
94
0
67
44
0
2
52
1.14
8938--8974
2
19.0
2
88
5
58
45
0
2
51
1.15
9769--9810
16
2.6
16
88
3
66
61
0
28
9
1.27
10959--11020
26
2.3
26
83
8
72
22
25
17
33
1.96

Tables:   1

The End!