Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009897.1 Corchorus capsularis cultivar CVL-1 contig09918, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8776

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--1436
199
7.2
198
87
3
1928
33
13
17
34
1.90
4--1436
600
2.4
599
87
3
2019
33
13
17
34
1.90
9--1436
401
3.6
396
86
3
1938
33
13
17
34
1.90
3507--3533
1
27.0
1
100
0
54
0
0
0
100
0.00
3809--3851
20
2.2
20
100
0
86
48
16
0
34
1.46
5814--5895
32
2.5
33
90
5
123
51
13
8
26
1.70
6031--6086
30
1.9
30
85
7
80
41
3
14
41
1.63
8714--8751
2
19.5
2
89
5
60
55
0
0
44
0.99

Tables:   1

The End!