Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009940.1 Corchorus capsularis cultivar CVL-1 contig09961, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30894

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--1266
337
3.8
331
84
5
1546
35
14
14
35
1.86
978--1562
294
2.0
295
86
3
811
37
14
14
34
1.86
1271--4635
331
10.2
331
84
3
4112
35
14
14
36
1.87
1271--4635
664
5.1
662
84
3
4301
35
14
14
36
1.87
10755--10783
2
15.0
2
92
7
51
48
0
0
51
1.00
12271--12312
2
22.5
2
81
13
54
52
2
0
45
1.13
14293--14393
51
2.0
52
92
2
168
28
19
5
45
1.74
24699--24768
27
2.6
27
97
0
131
15
30
27
27
1.96

Tables:   1

The End!