Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01009948.1 Corchorus capsularis cultivar CVL-1 contig09969, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7992

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
230--1355
201
5.6
201
87
4
1511
35
18
13
33
1.90
3855--3898
2
22.5
2
90
4
72
45
0
2
52
1.13
5313--6856
323
4.8
322
78
9
1456
34
13
15
36
1.87
5286--6844
655
2.4
646
80
8
1675
34
13
15
36
1.87
6609--7105
267
1.9
259
83
5
640
34
12
16
37
1.86

Tables:   1

The End!