Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010299.1 Corchorus olitorius cultivar O-4 contig10331, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13553

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
468--1138
360
1.9
352
81
8
795
32
15
16
35
1.91
1--1473
681
2.2
679
86
5
2056
32
15
16
35
1.90
146--5098
656
7.5
646
81
8
5190
32
15
16
35
1.90
825--5118
334
13.0
330
71
14
2649
33
14
16
35
1.90
5344--9492
332
12.6
329
73
12
2916
33
15
15
35
1.89
5381--9492
662
6.2
657
80
9
3866
33
15
15
35
1.89
5344--9491
993
4.2
985
80
9
4206
33
15
15
35
1.89
7509--7542
13
2.5
13
90
4
50
29
5
2
61
1.34
9838--13553
639
5.7
632
79
9
2843
33
15
15
35
1.90
12368--13553
658
1.8
656
91
2
1990
33
16
15
34
1.91
9920--13548
322
11.2
318
76
11
2822
33
15
15
35
1.90

Tables:   1

The End!