Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010534.1 Corchorus olitorius cultivar O-4 contig10566, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8681

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1106--3738
331
8.1
330
84
5
3309
36
17
16
30
1.92
1825--3738
980
1.9
985
86
3
2742
35
17
16
30
1.91
4283--4672
209
1.9
208
90
1
620
36
18
17
26
1.93
4496--8580
331
12.4
331
84
4
4944
35
17
16
30
1.92
4496--8681
995
4.2
987
84
5
4942
35
17
16
30
1.92

Tables:   1

The End!