Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010838.1 Corchorus olitorius cultivar O-4 contig10870, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2400

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
54--318
80
3.3
79
68
15
220
35
9
11
44
1.73
239--721
166
2.9
166
90
2
745
34
10
10
44
1.73
606--1096
142
3.6
132
80
9
456
33
10
10
45
1.73
736--1096
142
2.6
142
86
1
485
33
10
10
45
1.72
938--1268
172
1.9
172
88
3
497
35
11
8
45
1.71

Tables:   1

The End!