Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010916.1 Corchorus olitorius cultivar O-4 contig10948, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37919

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
676--1295
312
2.0
312
98
0
1195
35
12
15
35
1.86
11924--11983
30
2.0
30
96
0
111
15
10
21
53
1.70
26882--26923
14
2.8
15
86
13
52
23
57
0
19
1.41
33237--34806
329
4.8
330
82
4
1643
33
14
15
36
1.87
35626--35857
128
1.8
129
85
2
333
24
19
21
34
1.97
35755--37919
333
6.6
330
80
6
2177
32
15
17
35
1.91
35755--37919
655
3.3
646
80
6
2187
32
15
17
35
1.91
35727--37919
988
2.2
976
82
6
2697
32
15
17
35
1.91

Tables:   1

The End!