Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01010975.1 Corchorus olitorius cultivar O-4 contig11007, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2042

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2042
48
43.1
48
85
4
2544
41
19
23
14
1.89
1--2042
144
14.4
144
87
4
2819
41
19
23
14
1.89
633--698
33
2.0
33
96
0
123
45
7
34
12
1.70
602--753
81
1.9
80
89
2
234
44
17
25
13
1.85
1050--1115
33
2.0
33
96
0
123
50
6
31
12
1.64
1002--1163
81
2.0
81
91
0
261
43
16
25
14
1.85

Tables:   1

The End!