Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011032.1 Corchorus olitorius cultivar O-4 contig11065, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1398

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--611
156
3.9
155
92
2
915
19
18
19
42
1.90
550--675
64
2.0
64
95
0
225
20
19
15
43
1.88
236--982
371
2.0
374
92
1
1250
20
18
18
42
1.90
611--1398
154
5.1
154
89
3
1165
21
19
17
42
1.90
89--1134
525
2.0
528
91
2
1719
20
18
18
42
1.89
611--1397
309
2.6
308
89
3
1199
21
18
17
42
1.90

Tables:   1

The End!