Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011855.1 Corchorus olitorius cultivar O-4 contig11888, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4835

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1216
154
7.9
153
88
1
1738
21
19
18
40
1.91
2003--2049
19
2.5
19
96
0
85
10
19
36
34
1.86
2003--2057
19
2.9
19
89
2
58
12
16
32
38
1.86
2021--2077
20
2.8
20
71
15
55
14
15
33
36
1.88
2455--4833
154
15.4
154
87
2
3220
21
18
18
40
1.91
2455--4833
307
7.7
306
88
2
3205
21
18
18
40
1.91

Tables:   1

The End!