Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01011896.1 Corchorus olitorius cultivar O-4 contig11929, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7623

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19--855
153
5.5
153
88
4
1196
22
18
18
40
1.91
19--3351
308
10.5
306
76
12
2227
21
18
18
41
1.91
749--962
107
2.0
107
92
0
356
23
18
18
39
1.92
604--1115
261
2.0
260
88
4
773
22
19
18
40
1.92
856--6724
154
37.7
154
79
10
3747
21
18
18
41
1.91
856--6724
461
12.6
462
77
11
5414
21
18
18
41
1.91
856--4622
615
6.2
616
88
3
5552
21
18
18
41
1.91
3223--3483
130
2.0
128
86
2
362
20
17
21
41
1.90
3351--4622
307
4.1
308
92
1
2061
21
18
19
40
1.91
4625--6724
460
4.6
461
89
3
3048
21
18
18
41
1.91
6620--6831
107
2.0
107
92
0
352
23
18
17
39
1.92
6727--7619
154
5.9
154
87
4
1265
21
18
18
41
1.90
6160--7291
567
2.0
567
87
2
1614
22
18
18
40
1.91

Tables:   1

The End!