Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012083.1 Corchorus olitorius cultivar O-4 contig12116, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4461

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
103--143
4
10.2
4
100
0
82
24
0
24
51
1.49
62--207
75
1.9
75
91
2
240
33
2
15
48
1.57
119--231
59
1.9
59
94
3
201
34
2
15
47
1.59
178--207
4
7.5
4
92
0
51
23
0
20
56
1.42
746--779
7
4.7
7
89
7
50
0
2
8
88
0.62
1372--2109
355
2.1
357
92
2
1241
41
12
7
38
1.71

Tables:   1

The End!