Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012155.1 Corchorus olitorius cultivar O-4 contig12188, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  60673

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24727--24791
2
32.5
2
100
0
130
50
49
0
0
1.00
24791--24823
2
16.5
2
93
0
57
51
3
0
45
1.16
26229--26278
21
2.4
21
89
0
82
44
12
36
8
1.71
38603--38911
114
2.7
114
100
0
618
21
2
26
49
1.61
38850--38974
63
2.0
63
95
0
223
19
2
25
52
1.58
39485--39531
24
2.0
24
100
0
94
34
19
8
38
1.82
47066--47218
31
4.9
31
86
4
166
36
27
20
15
1.93
47154--47213
29
2.3
24
73
24
66
36
25
20
18
1.94
51988--52033
23
2.0
23
100
0
92
17
34
13
34
1.88
53742--60660
333
21.3
329
78
9
5788
34
14
16
34
1.89
58358--58396
11
3.6
11
93
3
62
74
5
10
10
1.21
54924--60661
663
8.8
645
80
9
5320
34
14
16
34
1.89

Tables:   1

The End!