Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012282.1 Corchorus olitorius cultivar O-4 contig12315, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7433

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--2591
335
7.7
333
88
2
3649
30
17
17
34
1.93
18--2591
671
3.9
668
90
1
3991
30
17
17
34
1.93
2344--2842
262
1.9
262
89
1
768
31
18
16
33
1.93
1661--3520
929
2.0
932
89
1
2820
31
17
17
34
1.93
2586--7432
333
14.6
333
88
2
6907
31
16
17
34
1.93
2586--7432
668
7.3
666
89
2
7015
31
16
17
34
1.93

Tables:   1

The End!