Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012342.1 Corchorus olitorius cultivar O-4 contig12375, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30599

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--381
200
1.9
204
94
2
681
35
11
8
44
1.72
898--967
36
1.9
36
88
0
104
61
7
10
21
1.51
1589--1658
36
1.9
36
91
0
113
60
8
10
21
1.55
780--2166
692
2.0
691
98
0
2659
38
9
14
38
1.78
4555--4591
6
6.2
6
96
0
65
54
13
0
32
1.40
4558--4597
18
2.2
18
86
0
53
60
10
0
30
1.30

Tables:   1

The End!