Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012403.1 Corchorus olitorius cultivar O-4 contig12436, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24833

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1441--1493
26
2.0
26
96
0
97
45
0
20
33
1.52
3023--3075
6
8.5
6
75
8
52
79
1
1
16
0.92
9384--9417
17
2.0
17
100
0
68
35
23
0
41
1.55
17147--17182
18
2.0
18
88
0
54
50
8
19
22
1.74
20126--24270
331
12.6
329
78
7
3728
36
15
14
33
1.88
20129--24270
663
6.3
657
79
7
3772
36
15
14
33
1.88
24623--24652
15
1.9
16
93
6
53
53
3
0
43
1.17

Tables:   1

The End!