Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012599.1 Corchorus olitorius cultivar O-4 contig12632, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9707

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1822--1959
45
3.2
44
87
5
210
38
21
5
34
1.78
5075--5119
22
2.0
22
100
0
90
44
17
0
37
1.49
5288--6346
195
5.3
198
82
6
1214
34
13
17
34
1.89
5288--6346
393
2.6
401
84
6
1125
34
13
17
34
1.89

Tables:   1

The End!