Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012739.1 Corchorus olitorius cultivar O-4 contig12772, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15855

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
260--2983
336
8.2
329
76
8
1992
36
15
14
33
1.88
3470--3499
15
1.9
16
93
6
53
53
3
0
43
1.17
4009--4047
20
1.9
21
84
5
53
66
7
0
25
1.18
4010--4052
12
3.4
14
79
20
51
65
4
0
30
1.13
5115--5144
15
2.0
15
100
0
60
60
0
20
20
1.37
5294--5468
90
1.9
90
89
4
273
34
22
7
34
1.83
14664--15852
333
3.6
333
86
1
1679
33
14
17
34
1.90

Tables:   1

The End!