Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01012902.1 Corchorus olitorius cultivar O-4 contig12935, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19142

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1060--3703
986
2.7
958
80
7
2671
32
14
15
37
1.88
541--6612
330
18.2
331
72
12
2857
34
13
15
37
1.86
4144--4173
15
1.9
16
93
6
53
43
0
3
53
1.17
13497--13613
60
2.0
60
100
0
234
35
11
13
39
1.80
18351--18404
28
2.0
27
92
3
90
24
1
16
57
1.49
18634--18659
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!