Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013071.1 Corchorus olitorius cultivar O-4 contig13104, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23526

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
425--477
26
2.0
25
85
10
70
26
28
3
41
1.73
1996--2133
33
4.2
33
78
9
120
26
7
21
44
1.79
3929--4017
21
4.2
21
94
2
153
28
19
26
25
1.99
11757--11882
64
2.0
64
90
0
198
30
26
23
19
1.98
19866--19905
20
2.0
20
85
9
55
42
12
2
42
1.56
20830--23223
154
15.5
154
92
1
3796
21
17
19
41
1.91
20830--23223
309
7.8
308
92
1
3832
21
17
19
41
1.91
20830--23223
925
2.6
923
92
2
3992
21
17
19
41
1.91
20830--23207
463
5.1
461
91
1
3816
21
17
19
41
1.91

Tables:   1

The End!