Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013150.1 Corchorus olitorius cultivar O-4 contig13183, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46399

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--3931
332
11.9
332
85
4
5181
34
14
16
33
1.90
2--3931
666
6.0
661
86
3
5128
34
14
16
33
1.90
3630--4217
284
2.0
288
88
1
878
34
14
17
33
1.90
3918--6107
335
6.7
331
85
5
2894
34
15
16
33
1.91
6632--7464
334
2.5
333
84
5
1029
37
14
13
34
1.86
7800--7850
21
2.5
20
75
15
50
58
1
3
35
1.28
7837--7866
15
1.9
16
93
6
53
53
3
0
43
1.17
12516--12569
25
2.2
25
96
0
99
35
12
12
38
1.82
12564--12767
105
1.9
105
90
0
327
31
14
13
40
1.84
16954--17008
26
2.1
27
93
3
94
38
0
14
47
1.45
16962--17021
26
2.3
26
79
2
66
53
1
10
35
1.44
26738--26762
2
12.5
2
100
0
50
0
48
0
52
1.00
29607--29710
43
2.3
44
91
4
165
50
13
20
16
1.78

Tables:   1

The End!