Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013407.1 Corchorus olitorius cultivar O-4 contig13440, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10466

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2211--2915
30
23.8
30
84
5
839
46
19
14
18
1.83
2211--2897
236
2.9
236
92
1
1087
46
20
14
18
1.83
2887--2978
38
2.4
38
81
0
103
42
23
14
19
1.88
2919--2995
38
2.0
38
87
5
111
45
19
16
18
1.86
3273--3431
69
2.3
71
92
4
277
27
16
28
27
1.97
3593--3654
26
2.4
26
88
0
88
43
22
17
16
1.87
3619--4219
35
17.0
35
77
6
433
40
19
20
19
1.91
3619--4228
106
5.8
106
77
5
536
40
19
20
19
1.91
3631--4228
71
8.5
70
76
4
441
40
19
20
19
1.92
8660--8690
16
1.9
16
93
0
53
22
12
25
38
1.90

Tables:   1

The End!