Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013496.1 Corchorus olitorius cultivar O-4 contig13529, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  73582

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
11206--11238
7
4.9
7
85
7
50
18
0
27
54
1.44
18552--19209
332
2.0
334
83
6
831
31
13
20
34
1.91
30523--30560
12
3.4
11
89
10
51
7
0
28
63
1.23
30692--30779
29
3.0
29
76
17
92
36
14
22
26
1.93
33960--33986
6
4.5
6
100
0
54
29
51
18
0
1.46
37883--37916
6
5.7
6
90
10
52
0
11
0
88
0.52
37883--37916
13
2.8
12
87
12
52
0
11
0
88
0.52
47904--47933
14
2.1
15
93
6
53
0
10
0
90
0.47
72124--73580
330
4.4
331
88
2
2144
32
14
17
35
1.90
72127--73580
665
2.2
661
92
2
2456
32
14
17
36
1.89

Tables:   1

The End!