Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013555.1 Corchorus olitorius cultivar O-4 contig13588, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9500

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1970--2358
197
2.0
197
89
2
602
36
19
14
29
1.92
2361--2751
192
2.0
193
89
2
590
35
17
14
32
1.90
2554--5709
322
9.8
323
86
2
4323
35
17
14
31
1.91
2554--5709
646
4.9
640
87
3
4612
35
17
14
31
1.91
5497--5915
206
2.0
208
86
2
594
38
18
16
26
1.91
5705--9003
648
5.1
645
89
1
4918
35
17
15
31
1.90
5705--9003
323
10.2
322
89
2
4783
35
17
15
31
1.90

Tables:   1

The End!