Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01013572.1 Corchorus olitorius cultivar O-4 contig13605, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32516

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
192--239
24
2.0
24
95
0
87
41
0
22
35
1.54
884--927
6
7.3
6
100
0
88
63
0
0
36
0.95
5479--5525
23
2.1
23
84
11
62
44
14
14
25
1.84
8478--8518
2
19.5
2
90
9
64
48
2
2
46
1.28
11523--11551
15
1.9
15
100
0
58
68
0
0
31
0.89
17973--18010
5
8.0
5
85
8
53
2
0
13
84
0.73
18353--18392
21
2.0
20
90
5
62
42
2
7
47
1.45
18402--18449
17
2.6
20
75
21
59
56
16
8
18
1.65
30538--31172
47
13.7
46
87
7
880
30
18
5
45
1.71
30538--31171
140
4.6
140
92
4
1018
30
18
5
45
1.71
30538--31181
93
6.9
93
88
5
948
30
18
4
45
1.70

Tables:   1

The End!