Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01014041.1 Corchorus olitorius cultivar O-4 contig14074, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11894

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2222--3154
36
26.1
36
82
7
882
46
11
16
25
1.81
2222--3053
145
5.8
144
85
6
921
46
12
16
25
1.81
2767--2825
18
3.3
18
67
9
57
47
13
13
25
1.79
2930--2987
18
3.2
18
66
9
55
51
10
13
24
1.72
6322--6359
14
2.7
14
80
15
51
50
7
13
28
1.69
7059--7091
16
2.1
16
88
5
50
84
0
15
0
0.61
7061--7093
11
3.1
11
82
8
50
81
0
18
0
0.68
8056--8277
66
3.4
66
91
3
333
28
22
24
24
2.00
8019--8385
43
8.5
43
77
9
255
25
23
25
24
2.00
8022--8413
22
18.0
22
76
9
259
26
23
25
25
2.00
9382--9453
3
24.0
3
97
0
135
65
0
1
33
1.02
11160--11235
40
1.9
40
89
5
118
43
14
15
26
1.85
11287--11390
41
2.5
41
78
3
102
49
12
11
26
1.75

Tables:   1

The End!